Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITA---SRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDP--DGLRELLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV |
| 4BGG Chain:C ((9-299)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW----LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI-----GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN----VGNNPR-------VGTKRYMAPEVLDETIQV-DCFDSYKRVDIWAFGLVLWEVAR------EDYKPPFYDV-----VPNDPSFEDMRKVVCVDQQRPNIPNRW---FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151114 for 2151 contacts (-70.3/contact) +
2D Compatibility (PS) -29440 + (NN) -21712 + (LL) 12076
1D Compatibility (HY) -23600 + (ID) 5300
Total energy: -219090.0 ( -101.85 by residue)
QMean score : 0.499
|
|
|