Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACE--KTSYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ |
4E01 Chain:A ((70-405)) | --------------------------LTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPP--IKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIED----EKLVRYFLDKTLTSRLGIRMLATHHLALHE-----DKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING------HVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA--------------GFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDG------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185557 for 2394 contacts (-77.5/contact) +
2D Compatibility (PS) -31942 + (NN) -11142 + (LL) 4320
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -247621.0 ( -103.43 by residue)
QMean score : 0.532
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