Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSGCAWGAEPPRFLEAFGRLWQVQSRLGSGSSASVYRVRCCGNPGSPPGALKQFLPPGTTGAAASAAEYGFRKERAALEQLQGHRNIVTLYGVFTIHFSPNVPSRCLLLELLDVSVSELLLYSSHQGCSMWMIQHCARDVLEALAFLHHEGYVHADLKPRNILWSAENECFKLIDFGLSFKEGNQDVKYIQTDGYRAPEAELQNCLAQAGLQSDTECTSAVDLWSLGIILLEMFSGMKLKHTVRSQEWKANSSAIIDH-------------IFASKAVVN-----------AAIPAYHLRDLIKSMLHDDPSRRIPAEMALCSPFFSIPFAPHIEDLVMLPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRGYLYQTLL |
| 4BGQ Chain:A ((10-301)) | ------------------VMNKFEILGVVGEGAYGVVLKCRH--KETHEIVAIKKFK-----------VKETTLRELKMLRTL-KQENIVELKEAFRRR-----GKLYLVFEYVEKNMLELLEEM-PNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH-NDVLKLCDFGFARNLSE-------TRWYRSPELLL-----------GAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQRL-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143374 for 1874 contacts (-76.5/contact) +
2D Compatibility (PS) -27034 + (NN) -14668 + (LL) 9856
1D Compatibility (HY) -16800 + (ID) 3350
Total energy: -195370.0 ( -104.25 by residue)
QMean score : 0.466
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