Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGPAAGGAAVADPAGCQDDVVALNEACYKYVQKGAPTVPPSQECCDAVKSVDVPCVCSYLGSPGVRDNISMEKVFYVSQQCGVSIPGNCGGSKV
M045 Chain:A ((3-161))
AGPAAGGAAVADPAGCQDDVVALNEACYKYVQKGAPTVPPSQECCDAVKSVDVPCVCSYLGSPGVRDNISMEKVFYVSQQCGVSIPGNCGGSKV
General information:
TITO was launched using:
RESULT:
Template:
M045.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1475 for 734 contacts (-2.0/contact) +
2D Compatibility (PS) -9744 + (NN) -7112 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 200
Total energy: -14931.0 ( -20.34 by residue)
QMean score : 0.027
(partial model without unconserved sides chains):
PDB file :
Tito_M045.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M045-query.scw
PDB file :
Tito_Scwrl_M045.pdb
: