Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSDCQNDIQMLETTCYKYVAKDAPTSPPSQECCDTMNGVDVPCVCSYLGAPGIKENISMEKVFYVAQQCGVSIPGNCGGSKRA
M045 Chain:A ((2-125))
GSDCQNDIQMLETTCYKYVAKDAPTSPPSQECCDTMNGVDVPCVCSYLGAPGIKENISMEKVFYVAQQCGVSIPGNCGGSKRA
General information:
TITO was launched using:
RESULT:
Template:
M045.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12706 for 576 contacts (22.1/contact) +
2D Compatibility (PS) -8659 + (NN) -5732 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 250
Total energy: 1665.0 ( 2.89 by residue)
QMean score : -0.025
(partial model without unconserved sides chains):
PDB file :
Tito_M045.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M045-query.scw
PDB file :
Tito_Scwrl_M045.pdb
: