Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNYYEILEY---V---APEEINKAYKRLGLKCHPDKLLP----KKRKISRIVKKAINGAALSKLELEEMQSL
1IUR Chain:A ((12-70))
-GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHL-QNEIN--RLEKQAFLDQNAD
General information:
TITO was launched using:
RESULT:
Template:
1IUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7460 for 243 contacts (-30.7/contact) +
2D Compatibility (PS) -5290 + (NN) -5108 + (LL) 372
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -20186.0 ( -83.07 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_1IUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IUR-query.scw
PDB file :
Tito_Scwrl_1IUR.pdb
: