Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNFNASFSNLYTRNGLIKLDEAFLDYIKSCDEDLFCSLIEAREETTPSSASFQYWTSESRKKEPVSSKNTASSSVSFQCATLESRKHPMSASQMTDSQLIIDLAYLLDGFIAKLFNVEKEIEELKKKHNDFAVIYKCKRLFVQRYALKKYADTENIDIDYVTSELNCFLTLPTTEKIFAEQV------MHWFEDRENHKDEIELAAQYAAWRVKNKRSI------LFNIHRKIDHENLISFSKKEVDKVEVLYSNKIKRRYGFDLTSEKVSLDKALDNAHYCIFCHKQNKDSCSKGLLETSLSFQHMTLKSKKKEEWIPVSSTGMTGK---CTQMSEGCIKSLLNNYNTFKRSPLKVELHGCPLEQKISEMNLVKSEGYNIASLAIAMIDNPLCAATGYKICNDCMNSCIYQKQEPVNVPMVETRILDDVLSLPYGFEIYSLLSRWNPLNFQQPLPKENTGKNVLVVGLGPAGFNLAHHLLNDGHNVIAIDGLKIEPLNDDLQPIKDFKHEKLSERIADGFGGVAEYGITSRWDKNYLKIIRLLLERRENFAIYGGIRFCGTVTVDDAFNLGFNHIALALGSGKPRMIKIKNILARGVRMASDFLMSLQLTGALKLDSLANLQVRMPIVIIGAGLTAIDTATEALAYYPIQAEKFL-------LRYEVLVDKYGKDYVEKDWTEEEREIADEFISHAQLICKEKELAKKENREAKILELMQSLGGVKVVYRKELKDSPSYRLNSEE----------VQNALSEGIYFIENSEPVEIMTDKYSHIESIKLIDTKSHEIKYIKARSILIAAGTEPNTVIATEDKKHFKLSNGYFTHLNSLGEEIDPILSPKMQNKDRILVYKQGGRTISFFGDLHPSYSGSVVKAMASAKNGYPIISQLLSGANTATVIPISSPITSVLNTGISASHTQLYECYNIRVTFITKDVISVPRHTAIQTLWLKSNLHQKGYHSSSSFLSPQCVTLGFSKIGYKQTQYATFSAKLTKNWTPVLRTGMTLSHRTNEEFFNRIKEQFTAKVVKVQYLTDKVVEVVIKAPLAAKNFQPGQFFRLQNFETNSRKINNTTFAMEGIAVTGTEVNKKKGLISTIVLETGGSTNLCRYLREGEQIILMGPTGRPTEVY |
| 3K30 Chain:A ((7-690)) | -----------------------------------------------------VAAPYDVLFEPVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEI------HATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLS---KRYNQRTDEYGGSLENR--MRLLRELLEDTLDECAGRAAVACRITVEEEIDGGI--TREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPV-VGVGRFTSPDAMVRQ--IKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCN---ICVSGDLTMSPIRCTQNPSMGEEWRR--GWHP----ERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR--DLGGRVTQESALP-------------GLSAWGRVKEYREAVLAELPNVEIYRES-----------PMTGDDIVEFGFEHVITATG-----ATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARRDAGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREVTQLA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51815 for 5841 contacts (-8.9/contact) +
2D Compatibility (PS) -66922 + (NN) 10661 + (LL) 28896
1D Compatibility (HY) -2800 + (ID) 4200
Total energy: -86180.0 ( -14.75 by residue)
QMean score : 0.151
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