Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALG-GFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
3HYK Chain:A ((4-121))
MIVGIGIDIIELNRIEKMLD----KFMERILTENERNVAKGLK-GSRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEVRNDDRGKPILITSTE-----HIVHLSISHSKEFAVAQVVLESSS-
General information:
TITO was launched using:
RESULT:
Template:
3HYK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86620 for 850 contacts (-101.9/contact) +
2D Compatibility (PS) -12668 + (NN) -5336 + (LL) 336
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -115538.0 ( -135.93 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3HYK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HYK-query.scw
PDB file :
Tito_Scwrl_3HYK.pdb
: