Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRNLLFLLPPEIAHSLAIMMLKRISYRKPIELPESLSVNCFNNK---FRSPVGLAAGFDKNAEVIRSMLSFGFGFIEAGTVTKHPQYGNAKPRIFRLIEDQGVINRLGFNNKGID-------YFLKQISETKL-DDCILGINIGKNSASKDQVSDYIDLIKMVYGKSSYIVLNISSPNTPNLRNLHNRQELSELLKSITLTRKSIDNSESVPIM--------------LKISPDIDQQTKEDIAGLALEYKIDGLTISNTTVSRDNLHSHHNESGGLSGRPLFKLSTELLSDIYKLTQGKILLIGCGGISSGADAYKKIKAGASLVQLYTALIYHGPRAVNKINLELAELVRKDGLSNIGEAVGCDCRF |
| 4CQ8 Chain:B ((32-395)) | IFLKFCLKYIDGEICHDLFLLLGKYNIL--PYDTSNDSIYACTNIKHLDFINPFGVAAGFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRD---NQEAGKLKNIILSVKEEIDNLEKNN--FLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKHS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129798 for 2900 contacts (-44.8/contact) +
2D Compatibility (PS) -36418 + (NN) -24215 + (LL) 772
1D Compatibility (HY) -27600 + (ID) 7050
Total energy: -224309.0 ( -77.35 by residue)
QMean score : 0.550
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