Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIDFNIINNMININTKRQITGFFVYIIGFSGSGKLSTAIELSNMIDALIVNSNFSNNTQVCSIYDNVFEHNHIPEEVQDR-I-YNIAQIMLQAIEAYLIHSKNYIFIDELMKNNDHNTKMYNSVVELSKRMNTQILPIVLRCDLLTLQKRIKLKRQRENKKATNISSIIENFRTHDSFIPPNAIEIENSNMSIKEVAEKITSQMHKLSQINSIYTKG
1ZP6 Chain:A ((6-181))
------------------DLGGNILLLSGHPGSGKSTIAEALANLPGVPKVHFH--SDDLWGYIKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAK-----EGYFVIL---------DGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCL---DRGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSGKDTDQALQSAINALQSGRFRID-----
General information:
TITO was launched using:
RESULT:
Template:
1ZP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91183 for 1324 contacts (-68.9/contact) +
2D Compatibility (PS) -18316 + (NN) -3609 + (LL) 2856
1D Compatibility (HY) 2400 + (ID) 1100
Total energy: -108952.0 ( -82.29 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1ZP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZP6-query.scw
PDB file :
Tito_Scwrl_1ZP6.pdb
: