Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLIYANSIPIGGVHITRDIAYGLCTSIEHAERIKILYGSTVVTSIDENEYITVQSNENDEQARIPKSELVDIIRPRIEEILELVKEQFRKQKDPINKVVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLDGEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
1T6C Chain:A ((10-315)) | ---------PIMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRIT--SLGTKVKETGRLQEDRIEETIQVLKEYKKLIDE-------------FKVERVKAVATEAIRRAKNAEEFLERVKREV-------------------------------------------------------GLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVREVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKVKKPVDTIVGLG-------------------GTITTLAALEYNVYPYDPQKVHGKVLT-----YGQIKKWFDTFKEIPSEERSKRFRQV---EDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSEVLKENHS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149689 for 2613 contacts (-57.3/contact) +
2D Compatibility (PS) -32364 + (NN) -6578 + (LL) 6792
1D Compatibility (HY) -2800 + (ID) 2400
Total energy: -187039.0 ( -71.58 by residue)
QMean score : 0.348
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