Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSFCVKAPAKINLFLHVVEKKETGYHLIEGLFVFANLSNFLEIKVGEKDFRYDNPIVEFVNSELKISNKYNTVMRAVNLLLRHAPVRTKVTVKVVKNIPTSAGLGSGSSDAGAVIRTLGKLWKIDRPILNEIALSVGADVPASIDSKPVLVRGIGEELCYINKFSLPTNIVLAKPKKKFLSTPEVFSKYGGNFSKPIEWRDDTEKDLLK-LLKETENDLQEIAISLVPEIRDVILALESQEGSILSRMSGSGVTCFGIFDSEENAKTAAVNIREKQPEWWVCDAQLIV |
1UEK Chain:A ((1-268)) | ---MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSGLHFQGPY-----------GRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD-LFALARTLGADVPFFLLGRGAEARGVGERLKPLA--LPPVPAVVFFPGLR-VPTPLVYRAVRPEDFGPDLPVEAILEALARGEEPPYWNSLEGPAFRLFPELKEVRGRMRAL-GLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126117 for 2335 contacts (-54.0/contact) +
2D Compatibility (PS) -28541 + (NN) -3161 + (LL) 2308
1D Compatibility (HY) -6400 + (ID) 3950
Total energy: -165861.0 ( -71.03 by residue)
QMean score : 0.390
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