Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MANVSSDTELIKSTIMSIIDQNKGRDI-VTFDVQNKTIIAKYMIIASGDSSRHVKALAE------------------HVMKSL-KQYYKMDVEGMDEGNWVILNFQGIMVHIFRPEVREYYKIEELWN
1XBF Chain:A ((4-134))
VIEYSLKTSNDDQFIDITNLVKKAVDESGVSDGMAVVFCPHTTAGITINENADPDVTRDILVNLDKVFPKVGDYKHVEGNSHAHIKASLMGSSQQIIIEN---GKLKLGTWQGIYFTEFDGPRDRKVFVKIILE
General information:
TITO was launched using:
RESULT:
Template:
1XBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43900 for 720 contacts (-61.0/contact) +
2D Compatibility (PS) -11000 + (NN) 726 + (LL) 236
1D Compatibility (HY) -400 + (ID) 800
Total energy: -55138.0 ( -76.58 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_1XBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XBF-query.scw
PDB file :
Tito_Scwrl_1XBF.pdb
: