Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAVVKELAHPLFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSAVGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYED--NSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLKYLSEKNSYLVKLALSHALLLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAYKCDANI-----------------------AMHYFALTKKACIEGNLKQFVKYAELAVRNLPKDSPYLLQIEDMKRFNE |
| 1XNF Chain:A ((50-248)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN--DPFRSLWLYLAE-QKLDEKQAKEVLKQHFEKSDKEQWGW---NIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65341 for 1314 contacts (-49.7/contact) +
2D Compatibility (PS) -19175 + (NN) -18406 + (LL) 16016
1D Compatibility (HY) 1200 + (ID) 1500
Total energy: -87206.0 ( -66.37 by residue)
QMean score : 0.426
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