Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3ARA Chain:C ((38-148))
------------------------PTRGSARAAGYDLYSAYDYTI--PPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQAL-----------------
General information:
TITO was launched using:
RESULT:
Template:
3ARA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60722 for 717 contacts (-84.7/contact) +
2D Compatibility (PS) -12136 + (NN) -5168 + (LL) 2300
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -88076.0 ( -122.84 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_3ARA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ARA-query.scw
PDB file :
Tito_Scwrl_3ARA.pdb
: