Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQD-KYKSIFCIVDLYAITANK-LSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKLGHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDSILGF-DFATLKCRPEISNLINIYSVLSN--LDVDKVCEEMN--KYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
2G36 Chain:A ((14-340)) | ---RILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDV-SKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI-----DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDE-VFPEPEAILSR-VPKLPGT-DG-RKMSKSYG---NIINLEISEKELEQTILRMMTDP-ARVRRSDP--GNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLMF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180649 for 2449 contacts (-73.8/contact) +
2D Compatibility (PS) -33355 + (NN) -14472 + (LL) 800
1D Compatibility (HY) -20000 + (ID) 4900
Total energy: -252576.0 ( -103.13 by residue)
QMean score : 0.492
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