Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENEGVLLVLSSPSGAGKTTILERLLERSTN-LVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKR--DKYDYVVINDDIDKSVEEISSILDKERLKRSGV
1EX7 Chain:A ((1-184))
------SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIFAEK------
General information:
TITO was launched using:
RESULT:
Template:
1EX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87198 for 1333 contacts (-65.4/contact) +
2D Compatibility (PS) -20811 + (NN) -15097 + (LL) 1188
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -136418.0 ( -102.34 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_1EX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX7-query.scw
PDB file :
Tito_Scwrl_1EX7.pdb
: