Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGIVSTFFRGLSNYDDKNSGLRFFLVTLNDEIIGTCGFYIQ---------DSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCMK---PSVNLYKRLGFQILGNLYLYTSSA |
1S3Z Chain:A ((19-164)) | ------------------------------------------------------------------------------------------SHMDIRQM-NKTHLEHWRGLRKQLWPGHPDD--AHLADGEEIL-QADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERVIFYRKRC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99425 for 917 contacts (-108.4/contact) +
2D Compatibility (PS) -13757 + (NN) 1519 + (LL) 6700
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -109163.0 ( -119.04 by residue)
QMean score : 0.452
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