Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTT-EGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSR---TSKRVLTLEWIGATPVYEVEKLN-----NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDS---NNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPE-INVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 1NXK Chain:A ((68-322)) | -------------------------------------------------------------------------------------------------------------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--KA-------------------------------------------RREVELHWRAS---QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRAFTEREASEIMKSIGEA-IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----------------------------PYYVAPEV---------LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKED------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65160 for 1647 contacts (-39.6/contact) +
2D Compatibility (PS) -23894 + (NN) -4463 + (LL) 18992
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -81575.0 ( -49.53 by residue)
QMean score : 0.312
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