Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEP-EDGIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIEG
1G3K Chain:B ((1-172))
---TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEELP-
General information:
TITO was launched using:
RESULT:
Template:
1G3K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132863 for 1482 contacts (-89.7/contact) +
2D Compatibility (PS) -19526 + (NN) -14472 + (LL) 232
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -189879.0 ( -128.12 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1G3K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3K-query.scw
PDB file :
Tito_Scwrl_1G3K.pdb
: