Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVKTPTINPKFEKKNNLALIESIDLDFIPYACHYDEETILTKQGELLKIIKLEDYSSADNYSDLRTEIRKSISKNIDSLYFTVWIHTVRKRNKLSLKWNKTGDFSDKLHSTWLDKLTNSKLRYINELYIVILVSDFNKHSNNSFFFGGIRNKHKLSLQENHQELQRVTDLIQSDLEPFGAKKLALRFNGDKVYSEMIEFLHYIVTLTHKDHPICERDLSQYIKNLKIAFGFNTFQTIFENQQKFGSVFCIKEYREIPLGNIDRCLQLDSELIITEIIIFTSNNKAMKEFKKQINMLQVSEDNTLLRNSEIKEIIELEGTSTIDFCQQKIIFTIFADDRNRLAENISSLSSVMSLIGLMMFRTDLHMENHFWAQLPGNFAFVTQPKNILAKYACSFAMLHDFTSGTLKGGRWKEAVTVFFSKKGSPYFFNF---HGKKNNGHTTILGAPNSGRTSLIN-FLLSES-RKFNPRIIILDNTGKSIIFTK-AVSGKYYIIDPKYKNKSLKFNPLNI----EDSASNRSMLVELIKRMVADTSLVGIKEKIKKVVDSIFAIPR----------ESRSISRISEMLLLLKGK-------------ISKWCGDGEFAYLFQDSDESDIDWKIKTI---SLNTANLTKHKECMSVILYYFLYSFEAQCDGSPAILVLDEAW-EI-SSIFPTEEGFDNWMQRMTELNVVVILSTENLNLAFASEFTQYLDKHVDT---RILMPNFNANRLYMKAF-SLSKEELNIILQTPTQEGLFLIKQYKGLVTLNLDLKN-IQEIHVLSANRETIKYMYEAIKEKGEEVNKWLPVFYGKCKT |
| 4AG6 Chain:A ((3-385)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGINDGSGIVLGKDRDGGLVLVDIWKRGGDRTNSNWTILAKPGAGKSFTAKMLLLREYMQ--GSRVIIIDPERE---YKEMCRKLGGVWIN--CTGGEGKINPLQVRLRPQSPLALHIQTLRTFFSLYLRDLTDTEKAALEDALVEVYKEAGITWDTDPRGVPNDKWPTVKELYEYCVKKAEENPETYGRLSVLLKRAAEGADSYLWAGPTAVEADSDFIVFDVHDLQNAEDQVKRAQYFNVLSFAWNILERDRR-ERTVLVVDEAWMLVDPQTPQAIAFLRDTSKRIRKYNGSLIVISQNVIDFLAPEVQRYGQALLDNPTYKLLLAQGEKDLEAITTLMNLSEAEHDLLVNAKRGEGLFVAGTQRIHIKIEAAPYEMQY--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195382 for 2645 contacts (-73.9/contact) +
2D Compatibility (PS) -35470 + (NN) -13965 + (LL) 33920
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -227247.0 ( -85.92 by residue)
QMean score : 0.431
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