Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIILVQEVVV-EGD-INLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ
1P9K Chain:A ((8-76))
--SNMATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQ------------
General information:
TITO was launched using:
RESULT:
Template:
1P9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9336 for 449 contacts (-20.8/contact) +
2D Compatibility (PS) -7003 + (NN) -1191 + (LL) 1288
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -19492.0 ( -43.41 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_1P9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9K-query.scw
PDB file :
Tito_Scwrl_1P9K.pdb
: