Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDH-ERTRENYDLKNDKNI---DYNERVKEIIESQKTGTRKTRKDAVLVNELLVTSDRDFFEQLDPGEQKRFFEESYKLFSERYGKQNIAYATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQDKFPEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVKSDLEVPAKRHMKSVEVPTGEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDNDRLKQHVRNLMSTDMAREYKKLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKSKISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNEFELTHNREVKKERSRDQGMSL |
| 1QOY Chain:A ((-4-298)) | -----------------SMAEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQ--TVYEWCGVATQLLAAYILLFDE-------------------------------YNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALD-SQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAG--VVVGP------FGL---------------IISYSIAAGVVEG--------------------KLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETE-----TTRFY---VDYDDLMLSLLKEAAKKMINTCNEYQKRHG---KKTLF-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 211217 for 2199 contacts (96.1/contact) +
2D Compatibility (PS) -30947 + (NN) -6763 + (LL) 8140
1D Compatibility (HY) 3200 + (ID) 1350
Total energy: 183497.0 ( 83.45 by residue)
QMean score : 0.178
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