Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYFRYKQFN-KDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIK-IKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAF--IKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
4DVK Chain:A ((1-157)) | ---ENITQWNLQDNGT-------------EGIQRAMFQRGVN--------------RSLHGIWPEKICTGVPSHLATDTELKAIHG----MMDASEKTNYTCCRLQRHEWNKHGWCNWYNIEPWILLMNKTQANLTEGQP---------------LRECAVTCRYD-----RDSDLNVVTQAR-DSPTPLTGCKKGKNFSFAGILVQ---------GPCNF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7608 for 1172 contacts (-6.5/contact) +
2D Compatibility (PS) -15542 + (NN) 4539 + (LL) 7036
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -17125.0 ( -14.61 by residue)
QMean score : 0.122
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