Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYYQPL-WTLVGAGVSS-LKSSRKDMESVIP-EGANWIK-QAVSSFQPENNSVILGD-----NTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFD---VGKYNKELERIVEERNITVNYNYNLVEIDGDKK-VATFEHIKAYDRKTISYDMLHVTPPMGPLD-VVKESTLS-DSEGWVDVNPTTLQHKSYSNVFALGDASNVPT--------SKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 1NHP Chain:A ((1-316)) | ----MKVIVLGSSHGGYEAVEELL--NLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDL----DNIYLMRGRQWAIKLKQKTV--------DPEVNNVVVIGSGYIGIEA--AEAFAKAG----KKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTD-----KNAYDADLVVVAVGVRPNTAWLKG-TLELHPNGLIKTDE-YMR-TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEP------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143992 for 2412 contacts (-59.7/contact) +
2D Compatibility (PS) -32008 + (NN) -13981 + (LL) 6564
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -196717.0 ( -81.56 by residue)
QMean score : 0.418
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