Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIH-NKPFPEGWHEWVQAAKAKP-VYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKS------KESRRQMVQKDHKLVMLFGDNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 4FYP Chain:A ((34-261)) | ---------------GLSINYP---NCRSWHLGVETSNIINFDTVPANCKAYVED---YLITSKQYQYDSKTVNKEAYFYAKGL------ALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLS-EVTVENLKAVGVTKWK--HLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVE------------------DTPGRVFKLPNPLY-----------YVPSLEHHHH----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59 for 1689 contacts (-0.0/contact) +
2D Compatibility (PS) -23163 + (NN) -9080 + (LL) 5444
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -40658.0 ( -24.07 by residue)
QMean score : 0.461
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