Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTLLNVDRVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNGSIAFFGEEHAA---DDVEYKEHIGVVFDDL-RVPNKLTIKDIDKVFQSIYT---TWNSQKFFDLIKYFELP--LQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMELLEDFVAQ-GGGILISSHISEDIEQLADKLVFMKDGRMILTEQKDILLAQYGIVTTGDKDVEIPKHLIIASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIMRGEV |
| 3GFO Chain:A ((5-237)) | -DYILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEV-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131941 for 1764 contacts (-74.8/contact) +
2D Compatibility (PS) -23339 + (NN) -4921 + (LL) 4500
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -170201.0 ( -96.49 by residue)
QMean score : 0.523
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