Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKDN----GVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWP------------------CEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIK--PMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPL---------MRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK |
| 4GA8 Chain:A ((7-297)) | -------LSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152236 for 2159 contacts (-70.5/contact) +
2D Compatibility (PS) -27921 + (NN) -10495 + (LL) 1028
1D Compatibility (HY) -25200 + (ID) 5800
Total energy: -220624.0 ( -102.19 by residue)
QMean score : 0.532
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