Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVT-VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-MDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4IUO Chain:B ((57-272))
---------------------EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKA---TVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPMIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTI-
General information:
TITO was launched using:
RESULT:
Template:
4IUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118438 for 1709 contacts (-69.3/contact) +
2D Compatibility (PS) -23094 + (NN) -12030 + (LL) 2856
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -166356.0 ( -97.34 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4IUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IUO-query.scw
PDB file :
Tito_Scwrl_4IUO.pdb
: