Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFYQY----KNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
1ABA Chain:A ((1-39))
MFKVYGYDSNIHKCGPCDNAKRLLTVKKQPFEFINIMPE-----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ABA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15797 for 171 contacts (-92.4/contact) +
2D Compatibility (PS) -3765 + (NN) 453 + (LL) 5624
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -18435.0 ( -107.81 by residue)
QMean score : 0.844
(partial model without unconserved sides chains):
PDB file :
Tito_1ABA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ABA-query.scw
PDB file :
Tito_Scwrl_1ABA.pdb
: