Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFY--DFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVKDRQ--YISSNTENLLNINPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK |
| 1EFD Chain:N ((2-263)) | --GIDPNRIVALEWLPVELLLA-----------LGIVPYGVADTINYRLWVSE-----------PPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNSKDMDALMA-----TPLWQAMPFVRAGRFQRVPAV-WFYGATLSAMHFVRVLDNAIG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139745 for 2135 contacts (-65.5/contact) +
2D Compatibility (PS) -26899 + (NN) -9147 + (LL) 1456
1D Compatibility (HY) -12800 + (ID) 2100
Total energy: -189235.0 ( -88.63 by residue)
QMean score : 0.439
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