Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIG-VDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK
1STB Chain:A ((9-142))
---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS-
General information:
TITO was launched using:
RESULT:
Template:
1STB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10585 for 1004 contacts (10.5/contact) +
2D Compatibility (PS) -13834 + (NN) -4628 + (LL) 3588
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -16039.0 ( -15.98 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1STB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1STB-query.scw
PDB file :
Tito_Scwrl_1STB.pdb
: