Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --M-KKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEPTVDWL-RTALKNKKHVITANKDLLAVHLKLLEDLAEENGVA-LKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSK-MTKEQTTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVI-KLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEY-NAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSD-AEINIKEKSNFFVVVN-HVKGSIENFENELKAILPFHRSLRVAN-YDNQSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV---------- |
| 3MTJ Chain:A ((5-442)) | FQGMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGL-PLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQ-AIANGKHVVTANKHLVAKYGNEIFAAAQAKGV-MVTFEAAVAGGIPIIKALREGLTANRIEWLAGIINGTSNFILSEMRD-KGAAFDDVLKEAQRLGYAEADPTFDIEGIDAAHKLTILSAIAFG-IPMQFERAYTEGISQLTREDVRYAEELGYRIKLLGIARRAENGIELRVHPTLIPERRLIANV-DGAMNAVLVKGDAVGPTLYYGAGAGSEPTASAVVADLVDVTRLHTADPHHRVPHLAFQPDQLADTPILPMEAV----RTAYYLRLRAFRPGVLADITRILAD-----SSISIDAMVQKEQVDIILLT-HVTLEKNVNAAIAKIEALDAVAGKVMRIRLEDLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205761 for 3457 contacts (-59.5/contact) +
2D Compatibility (PS) -44005 + (NN) -8190 + (LL) 1460
1D Compatibility (HY) -28800 + (ID) 7350
Total energy: -292646.0 ( -84.65 by residue)
QMean score : 0.462
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