Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIA--KDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEY--KG--AATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
2Q7B Chain:A ((24-180))
-EYENNPYHLAQLVDLINYCQNIEAKLDI-KMAE-QDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRID-------------DKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLL--
General information:
TITO was launched using:
RESULT:
Template:
2Q7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84503 for 1066 contacts (-79.3/contact) +
2D Compatibility (PS) -16518 + (NN) -8813 + (LL) 1300
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -116984.0 ( -109.74 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2Q7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q7B-query.scw
PDB file :
Tito_Scwrl_2Q7B.pdb
: