Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKFE
1IQZ Chain:A ((2-81))
--KYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEPFDGDPNKFE
General information:
TITO was launched using:
RESULT:
Template:
1IQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54745 for 608 contacts (-90.0/contact) +
2D Compatibility (PS) -8901 + (NN) -7155 + (LL) 352
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -81899.0 ( -134.70 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_1IQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQZ-query.scw
PDB file :
Tito_Scwrl_1IQZ.pdb
: