Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVL-IKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNI---NQISLADAEKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVYIPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE
3SEF Chain:C ((31-280))-QYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKK-DDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSA---------IDPVIFSSRSVCYDMMYG-----------------IDGLGMLVGQAAESFMLW---------------------


General information:
TITO was launched using:
RESULT:

Template: 3SEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116733 for 1830 contacts (-63.8/contact) +
2D Compatibility (PS) -22936 + (NN) -2645 + (LL) 2836
1D Compatibility (HY) -11200 + (ID) 3900
Total energy: -154578.0 ( -84.47 by residue)
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_3SEF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SEF-query.scw
PDB file : Tito_Scwrl_3SEF.pdb: