Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------MDDLNKKYLIDLHQHQNSSIEVLREFAEGNEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFAS-ISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKV-YDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKGE
4PCA Chain:A ((6-226))HHHMRNVSLSKQDEYLNKLFAVD----TEGALKAHKTAPSELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVS-SNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT


General information:
TITO was launched using:
RESULT:

Template: 4PCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121846 for 1741 contacts (-70.0/contact) +
2D Compatibility (PS) -22534 + (NN) -8132 + (LL) 576
1D Compatibility (HY) -14400 + (ID) 2450
Total energy: -168786.0 ( -96.95 by residue)
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4PCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PCA-query.scw
PDB file : Tito_Scwrl_4PCA.pdb: