Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNK-PIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVY--KQPVCKVCGSQIETKIIATRNSHYCPVCQK |
1K82 Chain:A ((1-268)) | -PELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVS--EEIYR---------LSD-QPVLSVQRRAKYLLLELP----EGWIIIHLGMSGSLRILPE----ELPP-EKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYL---HQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK--------PGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138475 for 2093 contacts (-66.2/contact) +
2D Compatibility (PS) -26945 + (NN) -8160 + (LL) 1496
1D Compatibility (HY) -18400 + (ID) 4850
Total energy: -195334.0 ( -93.33 by residue)
QMean score : 0.346
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