Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSNDQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVNVNAHLKQIAQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVKLYNTGGAGHWVTA |
| 4G6D Chain:B ((1-198)) | MKLKILDKD----NATLNVFHRNKEHKTIDNVPTANLVDWYPLSN-----------AYEYKLSRNGEYLELKRLRSTLPSSYGLDDNNQDIIRDNNH---RCKIGYWYNPAVRKDNLKIIEKAKQYGLPIITEEYDANTVEQGFRDIGVIFQSLKTIVVTRYLEGKTEEELRIFNMKSEESQLNEALK---------------ESDFSVDLTYSDLGQIYNMLLLMKKISK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43017 for 1411 contacts (30.5/contact) +
2D Compatibility (PS) -20446 + (NN) -1545 + (LL) 1676
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: 15252.0 ( 10.81 by residue)
QMean score : 0.145
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