Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRIT--GGEPLMR-----RDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNR--NIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHI-EIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQS-FCSTCTRARL-SSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVAN------RQR-----KKINMNYIGG----------------------------------- |
| 4K36 Chain:A ((2-392)) | ----------PPLSLLIKPASSGCNLKCTYCF----YHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKFLVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVT-SNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFDFWYEDFLNGNRV--SIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEFFEYAFPRLINVANNIVDKLAAALEHHHHHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67929 for 2522 contacts (-26.9/contact) +
2D Compatibility (PS) -33582 + (NN) -2587 + (LL) 1376
1D Compatibility (HY) -14800 + (ID) 2600
Total energy: -120122.0 ( -47.63 by residue)
QMean score : 0.246
|
|
|