Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQLNNIHKSFNDVE----VIKGIDLSVEQGEVVTLIGRSGSGKTTLLRMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQS-GMVFQSYNLFPHKTALENVMEGLITVKK--LKKDEARGKSLELLEKVGLT-HVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKDLANE-GMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQGAPEEMFNRPKTEELRRFLNVINEE
1L2T Chain:B ((1-221))
MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDG------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1L2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123016 for 1721 contacts (-71.5/contact) +
2D Compatibility (PS) -23501 + (NN) -11595 + (LL) 2280
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -179832.0 ( -104.49 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_1L2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L2T-query.scw
PDB file :
Tito_Scwrl_1L2T.pdb
: