Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQASQKL-----GVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEVYQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLP--NMQINAADPGATNTDLVGDF---S-----------NNSKHVSEGIKPIIQLATIGADGPTGTFIN-GDGEMPW |
| 3GAF Chain:A ((11-250)) | -DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKP--FDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN----------VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97937 for 1872 contacts (-52.3/contact) +
2D Compatibility (PS) -23704 + (NN) -6013 + (LL) 900
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -134004.0 ( -71.58 by residue)
QMean score : 0.521
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