Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNALKKRPLIMGVSALTSFSEEEFLMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC
3RU6 Chain:A ((25-250))
MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKV-DDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRPFG--------VANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKI
General information:
TITO was launched using:
RESULT:
Template:
3RU6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177469 for 1792 contacts (-99.0/contact) +
2D Compatibility (PS) -24148 + (NN) -11736 + (LL) 184
1D Compatibility (HY) -26400 + (ID) 5850
Total energy: -245419.0 ( -136.95 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_3RU6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RU6-query.scw
PDB file :
Tito_Scwrl_3RU6.pdb
: