Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYL--LQSAPSEYVYTLRDLD--KDALIRPMASIGANQATEARLLVGQKGYD-RYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEERHKRLVVAQFDPFFPKNPFLKNDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKR--NHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR |
| 3R6O Chain:A ((22-323)) | --MNLRIVSFAWQPGVLIDDDTVAPLAPMSARELIALLPQISPLISDE----LVPLDSVALGAPIPEPGQVIALGFNYPTHDPVVFMKSPTSISGPRDAVIAPRTSHALDYEIEIAVVIGKPGYRIERSQAIKHVAGYMLANDITARDVALPFGQAQVVRGK------------------------------GYPTFCPTGPWLFTTG----SDTTFETF-DFELRINGELRQSGSTVDMTLGFAEVVETVSATIALRAGDIILTGTP---GGCGFQ------------FDPPRYLRPGDVIEAHSAK------------LGKMRLPVHDEKP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1764 for 2139 contacts (0.8/contact) +
2D Compatibility (PS) -26918 + (NN) 2980 + (LL) 7316
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -24308.0 ( -11.36 by residue)
QMean score : 0.169
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