Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSDLAIQACKNKLETITKDLFVSQNFYDFLVF---------
1BOO Chain:A ((3-322))NFGKKPAYTTSNGSMYIGDSLELLESFPE----ESISLVMTSPPFALQRKKEYGNL-------------------EQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPAR---------------------SIYNFRVLIRMIDEVGFFLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWWFS----------------------KTEWPKSDITKVLASIPPNLLQISNSESNGQYLANCKLMGI-------------KAHPARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILNGESLDLNSI


General information:
TITO was launched using:
RESULT:

Template: 1BOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33226 for 2084 contacts (-15.9/contact) +
2D Compatibility (PS) -28461 + (NN) -17524 + (LL) 4036
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -86775.0 ( -41.64 by residue)
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_1BOO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BOO-query.scw
PDB file : Tito_Scwrl_1BOO.pdb: