Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDEHNQEHDHLSPKEPESYQKAYACKEQQGEEKQEASEKEGEIKEDFELKYQEMREQYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGAHKSAVEVDKESALTKGLELTMEKLHEVLARHGIEGIECLEEFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND |
| 3BJ4 Chain:A ((12-48)) | ------------------------------------------------------------------------------------------------SNTIGARLNRVE-DKVTQLDQRLALITDMLHQLLSLHG--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4644 for 139 contacts (33.4/contact) +
2D Compatibility (PS) -4160 + (NN) -4236 + (LL) 12160
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 5308.0 ( 38.19 by residue)
QMean score : 0.515
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