Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIHMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHVANLPEVIKSPSLVDFVNALKNRDTAIIVSTGPSLNKQLPLLKEIAPYATLFCIDASFPILARAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIQKGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGKVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPTQSEQAKNLKIAKKKCEEIIKYA------NEKKTQVEEAFLKVAE-FLEKVEKLHEKNKLEELDFEELENLSAEIDNV-KELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYIYAHKYWLFSLAGGMDCVIEAIKMALKEW |
| 4OMV Chain:A ((3-205)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMLLYTKKDDIYSDIVRM-ILLIKGANAKIVDVSKEENSKHLEELNIITPNGNIPTLSTDDFAVYR-LSVIIEAIEDLYPFPPMFPVFPKQRANARILLEYVNKTFLQNIIKLQSPDLDEKQANEIKMLMQRDIISTYKKIVSERAQNINVLTLIITFVFYYFIKLK----ISIPTKDKNIIKEIKELLSEPNFIKTIKA---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30279 for 1310 contacts (-23.1/contact) +
2D Compatibility (PS) -20253 + (NN) -16155 + (LL) 32936
1D Compatibility (HY) -9600 + (ID) 1200
Total energy: -44551.0 ( -34.01 by residue)
QMean score : 0.296
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