Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESVKTVKTNKVGKNTETANTEASKETHFKQASAITNTLRSIGGIFTKIAKKVRELVKKHPKKSSVALVVLTHIACKRAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSTGDIDKQIELEQEKKEANKSGIKLEQERQKTEQERQKTNKSEIELEQERQKTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQEKHGQLFIKKARIKTGITTGIAIEIEAECKTPKPAKTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRNPQAHLPTSQSLLFVQKIFADINKEIEAVANTEKKTEKAGYGYSKRM |
1RPW Chain:D ((62-120)) | ------------------------------------------------------------------------------------------------------------------------------------------------QEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36570 for 294 contacts (124.4/contact) +
2D Compatibility (PS) -6673 + (NN) -3708 + (LL) 21344
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: 44483.0 ( 151.30 by residue)
QMean score : 0.532
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