Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MKRILFFLAATTFLLRAETASATINTTV---DPNVMFSESSTGNVKKDR------KRVLKSMVDLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLEDCVEQKICYYEHRNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVLKK--MEEQAEKDTKAAFQ-----KRSSGELESHTDSPEFISSSKTQNSSNPDLDP-MTNANTLKETASKEPETSSKKEKKPKKKRRLSKKE----KQQQALQQEFEKQISDSSKSEK-------------------------------------- |
| 1W3B Chain:B ((1-388)) | GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY--NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP-----NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 112754 for 2167 contacts (52.0/contact) +
2D Compatibility (PS) -28686 + (NN) -5343 + (LL) 564
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: 66889.0 ( 30.87 by residue)
QMean score : 0.155
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