Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITIPIVIAFDNHYAIPAGVSLYSMLACAKSENPKSQNPQLQSDNKKLFYKI-HCLVDNLSLENQQKLKETLVPFSAFASVDFLDISTPNLYTTSVEPSVIDKIHEAFLQLNIYAKTRFSKMVMCRLFLASLFPQYDKIIMFDADTLFLNDVSESFFIPLDSYYFGAAKDFSSPKSLKHFQTEREREPRQKFSLY-EHYLKEKDMQIICENHYNVGFLIVNLKLWRADKLEEHLLNLTHQKGQCVF----CPEQDLLTLACYQKVLQL-PYIYNAHPFMANQKRFIPNQQEIIMLHFYFVGKPWIL-PTALYSKEWHEILLKTPFYAEYSVKFLKQMTECLSLQDKQKTFEFLAPLLNPKTLLEYVFFRLSKIFKRLKERFLNS |
| 2IUY Chain:A ((3-342)) | -----PLKVALVNIPLRVPG-----------SDAWISVPPQGYGGIQWVVANLMDGLLEL---GHEVFLLGAPGSPAGRPGLTVVPAGEPEEIERWLRTADVDVVHD-HSGGVIGPAGLPPGTAFISSHHFTTRPVNPVGCTYSSRAQRAHCGGGDD-----------APVIPIPVDPARYRSAADQVAKEDFLLFMGRVSPHKGALEAAAFAHACG---RRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPG-----ATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVG--YGTDFAPDEARRTLAGLPASDEVRRAAVRLWG----HVTIAERYVEQYRRLLAGATWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90601 for 2932 contacts (-30.9/contact) +
2D Compatibility (PS) -33571 + (NN) -6472 + (LL) 3972
1D Compatibility (HY) 9200 + (ID) 1800
Total energy: -119272.0 ( -40.68 by residue)
QMean score : 0.205
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